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68. Karunasagara S, Bayarkhangai B, Shim HW, Bae HJ, Lee H, Taghizadeh A, Ji Y, Mandakhbayar N, Kim HS, Hyun J, Kim TJ, Lee JH, Kim HW (2024) Electrically-stimulated cellular and tissue events are coordinated through ion channel-mediated calcium influx and chromatin modifications across the cytosol-nucleus space. Biomaterials, 314(122854). (IF=12.8, JCR=3.28%). 

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67. Han K, Choi G, Kim TJ* (2024) Fluorescence-based techniques for investigating estrogen receptor dynamics. BMB Reports. In Press. (Invited review)

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66. Han K, Suh J, Choi G, Jang YK, Ahn S, Lee Y, Kim TJ* (2024) Novel FRET-based Biosensors for Real-time Monitoring of Estrogen Receptor Dimerization and Translocation Dynamics in Living Cells. Advanced Science, e2406907. doi: 10.1002/advs.202406907.  (IF=14.3, JCR=6.62%).  (*corresponding author)

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65. Nguyen LH, Cho YE, Kim S, Kim Y, Kwak J, Suh JS, Lee J, Son K, Kim M, Jang ES, Song N, Choi B, Kim J, Tak Y, Hwang T, Jo J, Lee EW, Kim SB, Kim S, Kwon OB, Kim S, Lee SR, Lee H, Kim TJ*, Hwang S*, Yun H* (2024) Discovery of N-Aryl-N'-[4-(aryloxy)cyclohexyl]squaramide-Based Inhibitors of LXR/SREBP-1c Signaling Pathway Ameliorating Steatotic Liver Disease: Navigating the Role of SIRT6 Activation. Journal of Medicinal Chemistry, 67(19):17608-17628. doi: 10.1021/acs.jmedchem.4c01597. ( JCR=5.56%).  (*Co-corresponding author)

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64. Kim M, Han K, Choi G, Ahn S, Suh JS, Kim TJ* (2024) ECM stiffness regulates calcium influx into mitochondria via tubulin and VDAC1 activity. Animal Cells and Systems, 28(1): 417-427.

 

63. Choi G+, Kang H+, Suh JS, Lee H, Han K, Yoo G, Jo H, Shin YM, Youn B*, Kim TJ* (2024) Novel estrogen receptor dimerization BRET-based biosensors for screening estrogenic endocrine-disrupting chemicals. Biomaterials Research. 28:0010.  doi: 10.34133/bmr.0010. (IF=11.3, JCR=5.21%).  (+ Equal contribition, *Co-corresponding author)

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62. Jang YK, Suh JS, Lee Y, Choi G, Han KS, Ahn S, Kim TJ* (2024) A Novel Tension Sensor Unravels the Mechanistic Role of Tensin 1 in Cellular Force Transmission and ECM Recognition. In revision.

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61. Park SM, Lee JH, Ahn KS, Shim HW, Yoon JY, Hyun J, Lee JH, Jang S, Yoo KH, Jang YK, Kim TJ, Kim HK, Lee MR, Jang JH, Shim H, Kim HW (2023) Cyclic Stretch Promotes Cellular Reprogramming Process through Cytoskeletal-Nuclear Mechano-Coupling and Epigenetic Modification. Advanced Science, e2303395. doi: 10.1002/advs.202303395. (IF=15.1)

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60. Ahn S, Suh JS, Jang YK, Kim H, Han KS, Lee Y, Choi G, Kim TJ* (2023) TAUCON and TAUCOM: A Novel Biosensor Based on Fluorescence Resonance Energy Transfer for Detecting Tau Hyperphosphorylation-Associated Cellular Pathologies. Biosensors and Bioelectronics, 237:115533. doi: 10.1016/j.bios.2023.115533. (IF=12.6, JCR=2.32%)

 

59. Yi JM, Kang TH, Han YK, Park HY, Yang JH, Bae JH, Suh JS, Kim TJ, Kim JG, Cui YH, Suzuki H, Kumegawa K, Kim SJ, Zhao Y, Park IK, Hong SM, Chung JY, Lee SJ (2023) Human Neuralized is a novel tumour suppressor targeting Wnt/β-catenin signalling in colon cancer. EMBO Reports, e56335. (IF=9.421)

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58. Kim TJ, Lim GH (2023) Salicylic acid and mobile regulators of systemic immunity in plants: transport and metabolism. Plants, 12(5):1013.

 

57. Suh JS, Kim TJ* (2023) A novel DNA double-strand breaks biosensor based on fluorescence resonance energy transfer. Biomaterials Research.  27(1):15 (IF=15.863, JCR=3.06%). 

 

56. Ahn SH, Suh JS, Lim GH*, Kim TJ* (2023) The potenital effects of light irradiance in glaucoma and photobiomodulation therapy. Bioengineering, 10(2),223. (IF=5.046)

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55. Kim E, Suh JS, Jang YK, Kim H, Choi G, Kim TJ* (2022) Harmine inhibits proliferation and migration of glioblastoma via ERK signalling. Process Biochemistry. 122(1):356-362.

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54. Kim HS, Choi GH, Suk ME, Kim TJ* (2022) Resource for FRET-based biosensor optimization. Frontiers in Cell and Developmental Biology, 10:885394. doi: 10.3389/fcell.2022.885394. (IF=6.081)

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53. Kim HS, Suh JS, Jang YK, Ahn SH, Choi GH, Yang JY, Lim GH, Jung Y, Jiang J, Sun J, Suk M, Wang Y, Kim TJ* (2022) Förster Resonance Energy Transfer-based single-cell imaging reveals Piezo1-induced Ca2+ flux mediates membrane ruffling and cell survival. Frontiers in Cell and Developmental Biology (IF=6.081), doi: 10.3389/fcell.2022.865056

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52. Lee C, Kim J, Han J, Oh D, Kim M, Jeong H, Kim TJ, Kim SW, Kim JN, Seo YS, Suzuki A, Kim JH, Jung Y (2022) Formyl peptide receptor 2 determines sex-specific differences in the progression of nonalcoholic fatty liver disease and steatohepatitis.

Nature Communications , 13:578 (IF=17.694). 

 

51. Ahn SH, Suh JS, Jang YK, Kim HS, Choi GH, Kim EH, Kim TJ* (2022) Rhynchosia volubilis promotes cell survival via cAMP-PKA/ERK-CREB pathway. Pharmaceuticals, 15(1):73 (IF=5.215). 

 

50. Starostina I, Jang YK, Kim HS, Suh JS, Ahn SH, Choi GH, Suk M, Kim TJ* (2021) Distinct calcium regulation of TRPM7 mechanosensitive channels at plasma membrane microdomains visualized by FRET-based single cell imaging. (NPG) Scientific Reports, 11(1):17893. (IF=4.996)

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49. Kim TJ (2021) Mechanobiology: A New Frontier in Biology. Biology, 10(7), 570, https://doi.org/10.3390/biology10070570 (IF: 5.168)

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48. Jang YK, Suh JS, Suk M, Kim TJ* (2021) Force transmission in cellular adherens junction visualized by engineered FRET alpha-catenin sensor. Korean Chem. Eng. Res. 59(3):366-372.

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47. Raja G, Selvaraj V, Suk M, Suk KT, Kim TJ* (2021) Metabolic phenotyping analysis of graphene oxide nanosheets exposures in breast cancer cells: metabolomics profiling techniques. Process Biochemistry, 104: 39-45. (IF: 4.885)

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46. Suh JS, Kim HS, Kim TJ* (2021) Development of a SARS-CoV-2-derived receptor-binding domain-based ACE2 biosensor. Sensors and Actuators B-Chemical, 334:129663. (IF: 9.221, JCR=3.12%)

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45. Raja G, Gupta H, Youn GS, Gebru YA, Choi YR, Kim HS, Yoon SJ, Kim DJ, Kim TJ, Suk KT (2021) Recent advances of microbiome-associated metabolomics profiling in liver disease: principles, mechanisms, and applications. International Journal of Molecular Sciences, 22(3), 1160. (IF: 6.208)

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44. Kim J, Lee C, Shin Y, Wang S, Han J, Kim M, Kim JM, Shin SC, Lee BJ, Kim TJ, Jung Y (2020) Small extracellular vesicles from tonsil-derived mesenchymal stromal cells alleviate activation of hepatic stellate cells and liver fibrosis through miR-486-5p.

(Cell Press) Molecular Therapy, S1525-0016(20)30683-3. (IF: 12.910, JCR=3.46%)

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43. Kim HS, Suh JS, Jang YK, Ahn SH, Raja G, Kim JC, Jung Y, Jung SH, Kim TJ* (2020) Anti-cancer potential of persimmon (Diospryos kaki) leaves via the PDGFR-Rac-JNK pathway. (Nature.com) Scientific Reports, 10, 18119. (IF: 4.996)

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42. Karthi S, Vasanth-Srinivasan P, Ganesan R, Ramasamy V, Senthi-Nathan S, Khater H, Radhakrishnan N, Amala K, Kim TJ, Krutmuang P (2020) Target Activity of Isaria tenuipes (Hypocreales: Clavicipitaceae) Fungal Strains against Dengue Vector Aedes aegypti (Linn.) and Its Non-Target Activity Against Aquatic Predators. Journal of Fungi, 6(4),196. (IF: 5.724) 

 

41. Raja G, Jung Y, Jung SH, Kim TJ* (2020) 1H-NMR-based metabolomics for cancer targeting and metabolic engineering-A review. Process Biochemistry, 99, 112-122. (IF: 4.885) 

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40. Yogarajalakshmi P, Poonguzhali TV, Ganesan R, Karthi S, Senthil-Nathan S, Krutmuang P, Radhakrishnan N, Mohammad F,

Kim TJ, Vasantha-Srinivasan P, (2020) Toxicological screening of marine red algae Champia parvula (C. Agardh) against the dengue mosquito vector Aedes aegypti (Linn.) and its non-toxicity against three beneficial aquatic predators. Aquatic Toxicology, 222, 105474. (IF: 5.202) 

 

39. Raja G, Jang YK, Suh JS, Kim HS, Ahn SH, Kim TJ* (2020). Microcellular environmental regulation of silver nanoparticles in cancer therapy: a  critical revew. Cancers, 12(3), 664. (IF: 6.575)

 

38. Suh JS, Lee C, Pan Y, Wang Y, Jung Y, Kim TJ*(2020). A study on single cell polarized signals using polydimethylsiloxane-based micropatterned channel system. Korean Chem. Eng. Res., 58(1), 122-126.

 

37. Raja G, Cao S, Kim DH, Kim TJ* (2020). Mechanoregulation of titanium dioxide nanoparticles in cancer therapy. Materials Science & Engineering C , 107:110303. (IF=8.457)

 

36. Murfadunnisa S, Vasantha-Srinivasan P, Raja G, Senthil-Nathan S, Kim TJ, Ponsankar A, Dinesh-Kumar S, Chandramohan D, Krutmuang P (2019). Larvidial and enzyme inhibition of essential oil from Spheranthus amaranthroids (Burm.) against lepidopteran pest Spodoptera litura (Fab.) and their impact on non-target earthworms. Biocatalysis and Agricultural Biotechnology. 21:101324.

 

35. Ahn H, Yang J, Kim JY, Lee CY, Kim TJ*, Jung SH* (2019). Intraocular pressure-lowering effect of persimmon leaves (Diospyros kaki) in mouse model of glaucoma. International Journal of Molecular Sciences, 20(21); 5268. (IF: 5.923)

(*Co-correspondence)

 

34. Wang S, Kim J, Lee C, Oh D, Han J, Kim TJ, Kim SW, Seo YS, Oh SH, Jung Y (2019). Tumor necrosis factor-inducible gene 6 reprograms hepatic stellate cells into stem-like cells, which regenerate damaged livers of mice. Biomaterials , 219:119375. (IF=15.304)

 

33. Raja G, Jang YK, Suh JS, Prabhakaran VS, Kim TJ (2019). Advanced understanding of genetic risk and metabolite signatures in construction workers via cytogenetics and metabolomics analysis. Process Biochemistry (IF: 4.885), 86:117-126.

 

32. Suh JS, Jang YK, Kim TJ(2019). Real-time FRET imaging of cytosolic FAK signal on microwavy patterned-extracellular matrix. J. Biomed. Eng. Res., 40: 1-6. 

 

31. Kim TJ*, Lei L, Seong J, Suh JS, Jang YK, Jung SH, Sun J*, Kim DH*, Wang Y* (2019). Matrix rigidity-dependent regulation of Ca2+ at the plasma membrane microdomains by FAK visualized by fluorescence resonance energy transfer. Advanced Science , 6 (4):1801290. (IF= 17.521)

(*Co-corresponding author) (Our paper has been selected for the Health, Medical and Life Science virtual issue of Advanced Science: https://onlinelibrary.wiley.com/doi/toc/10.1002/(ISSN)2198-3844.Health-Medical-Life-Sciences)

 

30. Kang SW, Kim KA, Lee CH, Yang SJ, Kang TK, Kim TJ, Jung SH (2018). A standardized extract of Rhynchosia volubilis Lour. exerts a protective effect on benzalkonium chloride-induced mouse dry eye model. Journal of Ethnopharmacology (IF: 4.360), 215:91-100.

 

29. Jang H, Srichayet P, Park WJ, Heo HJ, Kim DO, Tongchitpakdee S, Kim TJ, Jung SH, Lee CY (2017). Phyllanthus emblica L. (Indian gooseberry) extracts protect aganist retinal degeneration in a mouse model of amyloid beta-induced Alzheimer's disease. Journal of Functional Foods (IF: 4.451), 37:330-338.

 

28. Sun J, Lei L, Tsai C.M, Wang Y, Shi Y, Ouyang M, Lu S, Seong J, Kim TJ, Wang P, Huang M, Xu X, Nizet V, Chien S, Wang Y (2017). Engineered proteins with sensing and activating modules for automated reprogramming of cellular functions.

Nature Communications , 8(1):477. (IF= 17.694)

 

27. Ahn HR, Kim KA, Kang SW, Lee JY, Kim TJ*, Jung SH* (2017). Persimmon leaves (Diospyros Kaki) extract protects optic nerve crush-induced retinal degeneration. (NPG) Scientific Reports (IF: 4.259), 7:46449. doi: 10.1038/srep46449.

(*Co-corresponding author)

 

26. Kim TJ*, Kim KA, Jung SH* (2017). Development of an endoplasmic reticulum calcium sensor based on fluorescence resonance energy transfer. Sensor and Actuator B - Chemical, 247: 520-525. (IF= 9.221) (*Co-corresponding author)

 

25. Kim TJ*, Jang H, Lee CY, Jung SH* (2016). Coffee: Emerging beneficial effects on ocular health. Coffee-Production, Consumption and Health Benefits. pp135-155. New York, Nova Science Publishers, Inc. (*Co-corresponding author)

 

24. Kim TJ, Joo C, Seong J, Vafabakhsh R, Botvinick EL, Berns MW, Palmer AE, Wang N, Ha T, Jakobsson E, Sun J, Wang Y (2015). Distinct mechanisms regulating mechanical force-induced Ca2+ signals at the plasma membrane and the ER in human MSCs. eLife , 10;4:e04876. (IF: 9.322)

 

23. Kim TJ, Zheng S, Sun J, Muhamed I, Wu J, Lei L, Kong X, Leckband DE, Wang Y (2015). Dynamic visualization of a-Catenin reveals rapid, reversible conformation switching between two tension states. (Cell Press) Current Biology , 19;25(2):218-24. (IF= 10.900)

 

22. Hwang K, Wu P, Kim TJ, Lei L, Tian S, Wang Y, Lu Y (2014). Photocaged DNAzymes as a general method for sensing metal ions in living cells. Angew Chem Int Ed Engl , 8;53(50):13798-802. (IF= 16.823)

 

21. Kim TJ, Sun J, Lu S, Zhang J, Wang Y (2014). The regulation of beta-adrenergic receptor-mediated PKA activation by substrate stiffness via microtubule dynamics in human MSCs. Biomaterials, 35(29):8348-56. (IF=:15.304)

 

20. Kim TJ, Sun J, Lu S, Qi YX, Wang Y (2014). Prolonged mechanical stretch initiates intracellular calcium oscillations in human mesenchymal stem cells. PLoS One, 9(10):e109378.

 

19. Lei L, Lu S, Wang Y, Kim TJ, Mehta D, Wang Y (2014). The role of mechanical tension on lipid raft dependent PDGF-induced TRPC6 activation. Biomaterials, 35(9):2868-77. (IF= 15.304)

 

18. Ouyang M, Lu S, Kim TJ, Chen CE, Seong J, Leckband DE, Wang F, Reynolds AB, Schwartz MA, Wang Y (2013). N-cadherin regulates spatially polarized signals through distinct p120ctn and beta-catenin-dependent signaling pathways.

Nature Communications, 4:1589. (IF: 17.694)

 

17. Lee ES*, Kim TJ*, Jeon CJ (2013). Identification of parvalbumin-containing retinal ganglion cells in rabbit. Experimental Eye Research. 110:113-24. (*Equally contributed) (IF: 3.467)

 

16. Kim TJ, Wang Y (2012). Single-cell imaging of calcium in response to mechanical stimulation. Cell Mechanics: From single scale-based models to multiscale modeling.10:265-275.

 

15. Seong J, Ouyang M*, Kim TJ*, Sun J, Wen PC, Lu S, Zhuo Y, Llewellyn NM, Schalepfer DD, Guan JL, Chien S, Wang Y (2011). Detection of focal adhesion kinase activation at membrane microdomains by fluorescence resonance energy transfer.

Nature Communications, 2:406. (IF= 17.694)(*Equally contributed)

 

14. Lee C, Kim TJ, Lee J, Hwang JY, Jakob A, Lemor R, Wang Y, Shung KK (2012). Ultrasonic stimulation of single bovine aortic endothelial cells 1GHz. IEEE International Ultrasonic symposium (IUS), 21-23.

 

13. Lu S*, Kim TJ*, Chen CE, Ouyang M, Seong J, Liao X, Wang Y (2011). Computational analysis of the spatiotemporal coordination of polarized PI3K and Rac1 activities in micro-patterned live cells. PLoS One, 6(6):e21293. (*Equally contributed)

 

12. Kim TJ, Wang Y (2010) Single-cell imaging of calcium in response to mechanical stimulation. Cell Mechanics: From Single Scale-Based Models to Multiscale Modeling. 265-275.

 

11. Liu B, Kim TJ, Wang Y (2010). Live cell imaging of mechanotransduction. J R Soc Interface, 7:S365-75. (IF: 4.118)

 

10. Kim TJ, Xu J, Dong R, Lu S, Nuzzo R, Wang Y (2009). Visualizing the effect of microenvironment on the spatiotemporal RhoA and Src activities in living cells by FRET. Small, 5(12):1453-9. (IF= 15.153)

 

9. Kim TJ, Seong J, Ouyang M, Sun J, Lu S, Hong JP, Wang N, Wang Y (2009). Substrate rigidity regulates Ca2+ oscillation via RhoA pathway in stem cells. J Cell Physiol. 218(2):285-93. (IF: 6.513)

 

8. Kim TJ, Jeon YK, Lee JY, Lee ES, Jeon CJ (2008). The photoreceptor populations in the retina of the greater horseshoe bat Rhinolophus ferrumequinum. Mol Cells, 26(4):373-9. (IF: 5.034)

 

7. Jeon YK*, Kim TJ*, Lee JY, Choi JS, Jeon CJ (2007). AII amacrine cells in the inner nuclear layer of bat retina: identification by parvalbumin immunoreactivity. Neuroreport, 18(11):1095-9. (*Equally contributed)  (IF: 1.837)

 

6. Kwon OJ, Kim MS, Kim TJ, Jeon CJ (2007). Identification of synaptic pattern of kainate glutamate receptor subtypes on direction-selective retinal ganglion cells. Neuroscience Research, 58(3):255-64.  (IF: 3.304)

 

5. Jeon YK, Kim TJ, Lee ES, Joo YR, Jeon CJ (2007). Distribution of parvalbumin-immunoreactive retinal ganglion cells in the greater horseshoe bat, Rhinolophus ferrumequinum. J Life Sci, 17(8):1068-74.

 

4. Ye EA, Kim TJ, Choi JS, Jin MJ, Jeon YK, Kim MS, Jeon CJ (2006). Ionotropic glutamate receptor GluR1 in the visual cortex of hamster: distribution and co-localization with calcium-binding proteins and GABA. Acta Histochem Cytochem, 39(2):47-54.

 

3. Jeon SA, Kwon OJ, Lee JY, Kim TJ, Jeon CJ (2006). Synaptic pattern of AMPA receptor subtypes upon direction-selective retinal ganglion cells. Neuroscience Research, 56(4):427-34.  (IF: 3.304)

 

2. Kim TJ, Jeon CJ (2006). Morphological classification of parvalbumin-containing retinal ganglion cells in mouse: single-cell injection after immunocytochemistry. Invest Ophthalmol Vis Sci (IF: 4.925), 47(7):2757-64.

 

1. Kim TJ, Ye EA, Jeon CJ (2006). Distribution of AMPA glutamate receptor GluR1 subunit-immunoreactive neurons and their co-localization with calcium-binding proteins and GABA in the mouse visual cortex. Mol Cells, 21(1):34-41. (IF: 5.034)